Inference of host-pathogen interaction matrices from genome-wide polymorphism data
Preprint
Märkle H. et al, (2023)
Validation of a HIV Whole Genome Sequencing Method for HIV Drug Resistance Testing in an Australian Clinical Microbiology Laboratory
Preprint
Jenkins F. et al, (2023)
An enrichment protocol and analysis pipeline for long read sequencing of the hepatitis B virus transcriptome.
Journal article
Ng E. et al, (2023), J Gen Virol, 104
The impact of pre-existing cross-reactive immunity on SARS-CoV-2 infection and vaccine responses.
Journal article
Murray SM. et al, (2023), Nat Rev Immunol, 23, 304 - 316
Pan-genotypic probe-based enrichment to improve efficiency of Hepatitis B virus sequencing
Preprint
Lumley SF. et al, (2023)
Association between disease severity and co-detection of respiratory pathogens in infants with RSV infection
Preprint
Lin G-L. et al, (2023)
A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy
Journal article
Downs LO. et al, (2023), PLOS Global Public Health, 3, e0001165 - e0001165
Utility of a buccal swab point-of-care test for the IFNL4 genotype in the era of direct acting antivirals for hepatitis C virus
Journal article
Sy A. et al, (2023), PLoS One
Efficacy of ultra-short, response-guided sofosbuvir and daclatasvir therapy for Hepatitis C: a single arm mechanistic pilot study.
Journal article
Flower B. et al, (2023), Elife, 12
A calculated risk: Evaluating HIV resistance to the broadly neutralising antibodies10-1074 and 3BNC117.
Journal article
Zacharopoulou P. et al, (2022), Curr Opin HIV AIDS, 17, 352 - 358
Constructing custom-made radiotranscriptomic signatures of vascular inflammation from routine CT angiograms: a prospective outcomes validation study in COVID-19.
Journal article
Kotanidis CP. et al, (2022), Lancet Digit Health, 4, e705 - e716
Genetic variation in TERT modifies the risk of hepatocellular carcinoma in alcohol-related cirrhosis: results from a genome-wide case-control study.
Journal article
Buch S. et al, (2022), Gut
Defining the key intrahepatic gene networks in HCV infection driven by sex.
Journal article
Marchi E. et al, (2022), Gut
Genotyping and population structure of the China Kadoorie Biobank
Preprint
Walters RG. et al, (2022)
The rs429358 Locus in Apolipoprotein E Is Associated With Hepatocellular Carcinoma in Patients With Cirrhosis.
Journal article
Innes H. et al, (2022), Hepatol Commun, 6, 1213 - 1226
A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy
Preprint
Downs LO. et al, (2022)
Durability of ChAdOx1 nCoV-19 vaccination in people living with HIV.
Journal article
Ogbe A. et al, (2022), JCI Insight, 7
Divergent trajectories of antiviral memory after SARS-CoV-2 infection.
Journal article
Tomic A. et al, (2022), Nat Commun, 13
A blood atlas of COVID-19 defines hallmarks of disease severity and specificity.
Journal article
COvid-19 Multi-omics Blood ATlas (COMBAT) Consortium. Electronic address: julian.knight@well.ox.ac.uk None. and COvid-19 Multi-omics Blood ATlas (COMBAT) Consortium None., (2022), Cell, 185, 916 - 938.e58